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SA National Bioinformatics Institute
SANBI aims to bring genome information, computational biology, and analytical tools to the South African research community. Hosts SA National EMBNet Node, provides links to Sequence Retrieval System (SRS), GeneKraal, and TB Genomes Analysis Server. Rese
http://www.sanbi.ac.za/
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Molecular Informatics Resource for the Analysis of Gene Expression
Information methodologies, tools, and technologies relating to the study of gene expression and signal transduction from the Institute for Transcriptional Informatics.
http://www.ifti.org/
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Center Structural Biology: Programs and Tools
User guides and worked examples for software applications in structural and molecular biology - from Yale Univ.
http://www.csb.yale.edu
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Biomolecular Interaction Network Database (BIND)
BIND is a database designed to store full descriptions of interactions, molecular complexes and pathways.
http://bind.ca
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PEDANT
Completely automatic and exhaustive analysis of protein sequence sets - from individual sequences to complete genomes
http://pedant.gsf.de/
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CUBIC: Columbia University Bioinformatics Center
Features PredictProtein service for sequence analysis and protein structure prediction, META for single-page interface to validated sequence analysis, PredictNLS for prediction and analysis of nuclear localization signals, EVA for evaluation of automatic
http://cubic.bioc.columbia.edu/
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Molecular Interactions Database (MINT)
MINT is a database designed to store functional interactions between biological molecules (proteins, RNA, DNA).
http://cbm.bio.uniroma2.it/mint/
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Scansite
Scansite searches for motifs within proteins that are likely to be phosphorylated by specific protein kinases or bind to domains such as SH2 domains, 14-3-3 domains or PDZ domains.
http://scansite.mit.edu/
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Verbumculus Genetic Sequence Analyzer
An interesting tool to discover and visualize over- or under-represented words in genetic sequences. Requires Java support in browser. Also available as a downloadable program.
http://www.cs.ucr.edu/~stelo/Verbumculus/
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IBM Bioinformatics Group - Tools & Content
Several genomics and proteomics tools, including multiple alignments, gene expression analysis, tandem repeat and motif discovery.
http://cbcsrv.watson.ibm.com/Tspd.html
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