Directory: Top/Science/Biology/Bioinformatics/Software/Software

Top / Science / Biology / Bioinformatics / Software / Software_Development /

Phylogenetic Analysis Library
PAL library is a Java toolkit for determining evolutionary trends.
http://www.cebl.auckland.ac.nz/pal-project/
Auckland.ac.nz ~ Site Info Whois Trace Route RBL Check

MolTalk
Software development for structural bioinformatics. Runs on Unix, Windows and MacOSX.
http://www.moltalk.org/
Moltalk.org ~ Site Info Whois Trace Route RBL Check

BioPHP
An open source project to develop PHP code and scripts for biocomputing. A wiki-like service allows collaboration between developers.
http://www.biophp.org
Biophp.org ~ Site Info Whois Trace Route RBL Check

BioRuby
BioRuby project aims to implement an integrated environment for Bioinformatics with Ruby language.
http://bioruby.org
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NeoBio
An open source library of Java bioinformatics algorithms. The current version consists mainly of sequence alignment algorithms such as Needleman- Wunsch and Smith-Waterman.
http://neobio.sourceforge.net
Sourceforge.net ~ Site Info Whois Trace Route RBL Check

Dynamite
Code generator for writing dynamic programming programs.
http://www.ebi.ac.uk/Dynamite/
Ebi.ac.uk ~ Site Info Whois Trace Route RBL Check

InterMine
A general-purpose object-oriented data warehouse system developed as part of the FlyMine project and made available as stand-alone open-source software.
http://www.intermine.org
Intermine.org ~ Site Info Whois Trace Route RBL Check

EST2uni
A tool to analyze a set of ESTs. Cleans, clusters and annotates the sequences and prepares a web site to browse the results in a complete automatic way.
http://www.melogen.upv.es/genomica/web_estpipe/index.php
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Sight
Extendable parallel system for automatic genome analysis. Software for analysing all potential genes in a defined genome region. Given two marker names, can output reports of genomic features between them. Features for converting between naming systems,
http://bioinformatics.org/jSight/
Bioinformatics.org ~ Site Info Whois Trace Route RBL Check

JCell
A Java based framework to reconstruct genetic interactions from microarray data.
http://www-ra.informatik.uni-tuebingen.de/software/JCell/
Uni-tuebingen.de ~ Site Info Whois Trace Route RBL Check