Directory: Top/Science/Biology/Bioinformatics/Software

Top / Science / Biology / Bioinformatics / Software /

FASTA
William Pearson's package for fast sequence comparison tools.
http://www.ebi.ac.uk/Tools/fasta/
Ebi.ac.uk ~ Site Info Whois Trace Route RBL Check

BioEdit
Free Windows biological sequence alignment editor.
http://www.mbio.ncsu.edu/BioEdit/bioedit.html
Ncsu.edu ~ Site Info Whois Trace Route RBL Check

MARBL
MARBL is a free (GPL) system to index the text portions of GenBank and associated NLM abstracts. Based on Mumps and the MDH.
http://www.cs.uni.edu/~okane/source/MARBL/proc1.html
Uni.edu ~ Site Info Whois Trace Route RBL Check

APBioKnoppix
Knoppix based bioinformatics software tools. Bootable from CD.
http://opensource.nus.edu.sg/wiki/index.php/APBioKnoppix
Nus.edu.sg ~ Site Info Whois Trace Route RBL Check

Geneious
This research software is designed for biologists and not computer scientists. It combines all the major DNA and protein sequence analysis tools into one software solution.
http://www.geneious.com
Geneious.com ~ Site Info Whois Trace Route RBL Check

Bioinformatics Software Tools
Provides access to a number of tools including biological databases, sequence allignment, analysis and manipulation tools and structural analysis tools. Also provides a glossary of bioinformatics terms.
http://www.bio32.com
Bio32.com ~ Site Info Whois Trace Route RBL Check

BioMAJ
Workflow engine dedicated to bio-data synchronization and processing.
http://biomaj.genouest.org
Genouest.org ~ Site Info Whois Trace Route RBL Check

biOpen
Commercial Mac OS X sequence analysis and structure visualization software.
http://www.lightwave-scientific.com/Resources/biOpen.pdf
Lightwave-scientific.com ~ Site Info Whois Trace Route RBL Check

msa.cgb.ki.se
Open source software developed by Timo Lassmann for multiple sequence alignment, including Kalign, Kalignvu and Mumsa.
http://msa.cgb.ki.se/cgi-bin/msa.cgi
Ki.se ~ Site Info Whois Trace Route RBL Check

STRING
Search for Tandem Repeats IN Genomes. Includes C source code and examples.
http://www.caspur.it/~castri/STRING/index.htm
Caspur.it ~ Site Info Whois Trace Route RBL Check