Directory: Top/Science/Biology/Bioinformatics/Software

Top / Science / Biology / Bioinformatics / Software /

Friend
An integrated multiple structure visualization and multiple sequence alignment application. Available for Windows, Linux.
http://mozart.bio.neu.edu/friend/friend.html
Neu.edu ~ Site Info Whois Trace Route RBL Check

DNA Counter
Small free Windows program to calculate nucleotides frequencies in DNA sequences.
http://www.dnabaser.com/download/DNA-Counter/index.html
Dnabaser.com ~ Site Info Whois Trace Route RBL Check

FASTA Converter
Free Windows tool for merging multiple FASTA files into a single FASTA file.
http://www.dnabaser.com/download/FASTA-Converter/index.html
Dnabaser.com ~ Site Info Whois Trace Route RBL Check

Biological Concept Diagram Editor
A tool designed for efficient knowledge and data capture from electronic resources for sharing, mining and presentation purposes.
http://arrayanalysis.mbni.med.umich.edu/draw/
Umich.edu ~ Site Info Whois Trace Route RBL Check

KoriBlast
Commercial graphical software for Blast searches.
http://www.korilog.com/products/improving-NCBI-BLAST.php
Korilog.com ~ Site Info Whois Trace Route RBL Check

AlmaKnowledgeServer
Text mining tool for genomics, proteomics platforms and drug discovery.
http://www.timelogic.com/aks/index.html
Timelogic.com ~ Site Info Whois Trace Route RBL Check

PhyloSort
A Java tool to sort phylogenetic trees by searching for user-specified subtrees that contain a monophyletic group of interest defined by operational taxonomic units.
http://phylosort.sourceforge.net/
Sourceforge.net ~ Site Info Whois Trace Route RBL Check

NEXML: Phylogenetic Data in xml
Exchange standard for representing phylogenetic data, inspired by the commonly used NEXUS format but more robust and easier to process.
http://www.nexml.org
Nexml.org ~ Site Info Whois Trace Route RBL Check

Bioinformatics Tools in Haskell
A bioinformatics library implemented in Haskell, including various utilities based on it.
http://malde.org/~ketil/
Malde.org ~ Site Info Whois Trace Route RBL Check

HMMER
Profiles protein sequence data using hidden Markov models of a statistical descriptions of a sequence family's consensus. HMMER is a freely distributable implementation of profile HMM software for protein sequence analysis.
http://hmmer.janelia.org/
Janelia.org ~ Site Info Whois Trace Route RBL Check